Detailed information of SNP:
SNP ID:
sf0224268845(Gbrowse)
Chromosome: chr02 Position: 24268845 |
Major allele:
C
Minor allele: T Reference allele: C |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of C(major allele) | Frequency of T(minor allele) |
---|---|---|---|
All | 1417 | 95.70% | 4.30% |
All Indica | 799 | 100.00% | 0.00% |
All Japonica | 495 | 88.08% | 11.92% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 375 | 100.00% | 0.00% |
Indica II | 213 | 100.00% | 0.00% |
Indica Intermediate | 211 | 100.00% | 0.00% |
Temperate Japonica | 333 | 84.68% | 15.32% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 88.24% | 11.76% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 95.24% | 4.76% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0224268845 | C->T | INTERGENIC | None |