Detailed information of SNP:



SNP ID: sf0224288248(Gbrowse)

Chromosome: chr02

Position: 24288248
Major allele: A

Minor allele: G

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1419 97.04% 2.96%
All Indica799 95.37% 4.63%
All Japonica497 99.60% 0.40%
Aus67 95.52% 4.48%
Indica I375 99.73% 0.27%
Indica II213 87.79% 12.21%
Indica Intermediate211 95.26% 4.74%
Temperate Japonica335 99.70% 0.30%
Tropical Japonica94 98.94% 1.06%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0224288248 A->G INTERGENIC None