Detailed information of SNP:
|
SNP ID:
sf0224614944(Gbrowse)
Chromosome: chr02 Position: 24614944 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1412 | 95.33% | 4.67% |
| All Indica | 796 | 98.62% | 1.38% |
| All Japonica | 494 | 89.88% | 10.12% |
| Aus | 66 | 98.48% | 1.52% |
| Indica I | 373 | 98.93% | 1.07% |
| Indica II | 213 | 99.06% | 0.94% |
| Indica Intermediate | 210 | 97.62% | 2.38% |
| Temperate Japonica | 333 | 91.89% | 8.11% |
| Tropical Japonica | 94 | 85.11% | 14.89% |
| Japonica Intermediate | 67 | 86.57% | 13.43% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 90.48% | 9.52% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0224614944 | G->A | INTERGENIC | None |