Detailed information of SNP:



SNP ID: sf0224632505(Gbrowse)

Chromosome: chr02

Position: 24632505
Major allele: G

Minor allele: A

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1417 81.79% 18.21%
All Indica798 95.36% 4.64%
All Japonica496 58.47% 41.53%
Aus67 95.52% 4.48%
Indica I375 99.20% 0.80%
Indica II213 99.06% 0.94%
Indica Intermediate210 84.76% 15.24%
Temperate Japonica335 56.12% 43.88%
Tropical Japonica94 65.96% 34.04%
Japonica Intermediate67 59.70% 40.30%
Group VI/Aromatic14 57.14% 42.86%
Intermediate42 85.71% 14.29%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0224632505 A->G INTERGENIC None