Detailed information of SNP:
|
SNP ID:
sf0224743119(Gbrowse)
Chromosome: chr02 Position: 24743119 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1401 | 97.57% | 2.43% |
| All Indica | 790 | 96.58% | 3.42% |
| All Japonica | 491 | 99.39% | 0.61% |
| Aus | 66 | 95.45% | 4.55% |
| Indica I | 375 | 99.47% | 0.53% |
| Indica II | 208 | 90.87% | 9.13% |
| Indica Intermediate | 207 | 97.10% | 2.90% |
| Temperate Japonica | 329 | 99.09% | 0.91% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 97.50% | 2.50% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0224743119 | G->A | INTERGENIC | None |