Detailed information of SNP:



SNP ID: sf0224787727(Gbrowse)

Chromosome: chr02

Position: 24787727
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1418 96.33% 3.67%
All Indica798 97.62% 2.38%
All Japonica497 99.40% 0.60%
Aus67 86.57% 13.43%
Indica I375 100.00% 0.00%
Indica II212 96.70% 3.30%
Indica Intermediate211 94.31% 5.69%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 97.87% 2.13%
Japonica Intermediate68 98.53% 1.47%
Group VI/Aromatic14 14.29% 85.71%
Intermediate42 78.57% 21.43%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0224787727 G->A INTERGENIC None