Detailed information of SNP:
|
SNP ID:
sf0224826496(Gbrowse)
Chromosome: chr02 Position: 24826496 |
Major allele:
G
Minor allele: T Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of T(minor allele) |
|---|---|---|---|
| All | 1418 | 93.79% | 6.21% |
| All Indica | 799 | 91.61% | 8.39% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 66 | 71.21% | 28.79% |
| Indica I | 375 | 94.67% | 5.33% |
| Indica II | 213 | 84.98% | 15.02% |
| Indica Intermediate | 211 | 92.89% | 7.11% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 85.71% | 14.29% |
| Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0224826496 | G->T | INTERGENIC | None |