Detailed information of SNP:
|
SNP ID:
sf0226043269(Gbrowse)
Chromosome: chr02 Position: 26043269 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1158 | 95.08% | 4.92% |
| All Indica | 542 | 89.48% | 10.52% |
| All Japonica | 496 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 205 | 84.88% | 15.12% |
| Indica II | 187 | 95.19% | 4.81% |
| Indica Intermediate | 150 | 88.67% | 11.33% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 67 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 39 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0226043269 | G->A | INTERGENIC | None |