Detailed information of SNP:



SNP ID: sf0226130915(Gbrowse)

Chromosome: chr02

Position: 26130915
Major allele: G

Minor allele: T

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of T(minor allele)
All1418 98.52% 1.48%
All Indica798 97.37% 2.63%
All Japonica497 100.00% 0.00%
Aus67 100.00% 0.00%
Indica I375 97.07% 2.93%
Indica II212 96.23% 3.77%
Indica Intermediate211 99.05% 0.95%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0226130915 G->T INTERGENIC None