Detailed information of SNP:
SNP ID:
sf0226130915(Gbrowse)
Chromosome: chr02 Position: 26130915 |
Major allele:
G
Minor allele: T Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of T(minor allele) |
---|---|---|---|
All | 1418 | 98.52% | 1.48% |
All Indica | 798 | 97.37% | 2.63% |
All Japonica | 497 | 100.00% | 0.00% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 375 | 97.07% | 2.93% |
Indica II | 212 | 96.23% | 3.77% |
Indica Intermediate | 211 | 99.05% | 0.95% |
Temperate Japonica | 335 | 100.00% | 0.00% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 100.00% | 0.00% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0226130915 | G->T | INTERGENIC | None |