Detailed information of SNP:



SNP ID: sf0226441956(Gbrowse)

Chromosome: chr02

Position: 26441956
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1419 98.66% 1.34%
All Indica799 100.00% 0.00%
All Japonica497 97.38% 2.62%
Aus67 94.03% 5.97%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 87.23% 12.77%
Japonica Intermediate68 98.53% 1.47%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 95.24% 4.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0226441956 G->A INTERGENIC None