Detailed information of SNP:
|
SNP ID:
sf0226670207(Gbrowse)
Chromosome: chr02 Position: 26670207 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1413 | 95.97% | 4.03% |
| All Indica | 793 | 97.35% | 2.65% |
| All Japonica | 497 | 99.80% | 0.20% |
| Aus | 67 | 50.75% | 49.25% |
| Indica I | 373 | 100.00% | 0.00% |
| Indica II | 211 | 97.16% | 2.84% |
| Indica Intermediate | 209 | 92.82% | 7.18% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 98.94% | 1.06% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0226670207 | G->A | INTERGENIC | None |