Detailed information of SNP:
|
SNP ID:
sf0226805773(Gbrowse)
Chromosome: chr02 Position: 26805773 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1418 | 91.96% | 8.04% |
| All Indica | 799 | 89.86% | 10.14% |
| All Japonica | 496 | 98.79% | 1.21% |
| Aus | 67 | 65.67% | 34.33% |
| Indica I | 375 | 94.13% | 5.87% |
| Indica II | 213 | 77.46% | 22.54% |
| Indica Intermediate | 211 | 94.79% | 5.21% |
| Temperate Japonica | 334 | 98.20% | 1.80% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 90.48% | 9.52% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0226805773 | G->A | INTERGENIC | None |