Detailed information of SNP:
|
SNP ID:
sf0226811314(Gbrowse)
Chromosome: chr02 Position: 26811314 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1409 | 95.03% | 4.97% |
| All Indica | 792 | 95.33% | 4.67% |
| All Japonica | 497 | 99.60% | 0.40% |
| Aus | 65 | 56.92% | 43.08% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 207 | 83.57% | 16.43% |
| Indica Intermediate | 210 | 98.57% | 1.43% |
| Temperate Japonica | 335 | 99.40% | 0.60% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 92.68% | 7.32% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0226811314 | G->A | INTERGENIC | None |