Detailed information of SNP:
|
SNP ID:
sf0226811774(Gbrowse)
Chromosome: chr02 Position: 26811774 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1410 | 95.53% | 4.47% |
| All Indica | 796 | 95.10% | 4.90% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 61 | 65.57% | 34.43% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 211 | 82.46% | 17.54% |
| Indica Intermediate | 210 | 99.05% | 0.95% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 92.86% | 7.14% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0226811774 | G->A | INTERGENIC | None |