Detailed information of SNP:
SNP ID:
sf0227164012(Gbrowse)
Chromosome: chr02 Position: 27164012 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
---|---|---|---|
All | 1419 | 97.39% | 2.61% |
All Indica | 799 | 99.87% | 0.13% |
All Japonica | 497 | 92.96% | 7.04% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 375 | 100.00% | 0.00% |
Indica II | 213 | 100.00% | 0.00% |
Indica Intermediate | 211 | 99.53% | 0.47% |
Temperate Japonica | 335 | 93.43% | 6.57% |
Tropical Japonica | 94 | 95.74% | 4.26% |
Japonica Intermediate | 68 | 86.76% | 13.24% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0227164012 | G->A | INTERGENIC | None |