Detailed information of SNP:



SNP ID: sf0228562324(Gbrowse)

Chromosome: chr02

Position: 28562324
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1414 94.48% 5.52%
All Indica799 99.75% 0.25%
All Japonica493 84.99% 15.01%
Aus66 100.00% 0.00%
Indica I375 99.73% 0.27%
Indica II213 99.53% 0.47%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica335 88.36% 11.64%
Tropical Japonica90 70.00% 30.00%
Japonica Intermediate68 88.24% 11.76%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 95.24% 4.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0228562324 G->A INTERGENIC None