Detailed information of SNP:



SNP ID: sf0229403468(Gbrowse)

Chromosome: chr02

Position: 29403468
Major allele: C

Minor allele: G

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of G(minor allele)
All1419 91.26% 8.74%
All Indica799 84.98% 15.02%
All Japonica497 100.00% 0.00%
Aus67 100.00% 0.00%
Indica I375 82.93% 17.07%
Indica II213 84.04% 15.96%
Indica Intermediate211 89.57% 10.43%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 92.86% 7.14%
Intermediate42 92.86% 7.14%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0229403468 C->G INTERGENIC None