Detailed information of SNP:



SNP ID: sf0230087835(Gbrowse)

Chromosome: chr02

Position: 30087835
Major allele: A

Minor allele: C

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of C(minor allele)
All1419 99.01% 0.99%
All Indica799 100.00% 0.00%
All Japonica497 97.59% 2.41%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 89.36% 10.64%
Japonica Intermediate68 97.06% 2.94%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 95.24% 4.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0230087835 A->C INTERGENIC None