Detailed information of SNP:
|
SNP ID:
sf0231195968(Gbrowse)
Chromosome: chr02 Position: 31195968 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1418 | 57.83% | 42.17% |
| All Indica | 799 | 91.86% | 8.14% |
| All Japonica | 497 | 0.00% | 100.00% |
| Aus | 67 | 95.52% | 4.48% |
| Indica I | 375 | 95.47% | 4.53% |
| Indica II | 213 | 96.71% | 3.29% |
| Indica Intermediate | 211 | 80.57% | 19.43% |
| Temperate Japonica | 335 | 0.00% | 100.00% |
| Tropical Japonica | 94 | 0.00% | 100.00% |
| Japonica Intermediate | 68 | 0.00% | 100.00% |
| Group VI/Aromatic | 14 | 7.14% | 92.86% |
| Intermediate | 41 | 51.22% | 48.78% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0231195968 | A->G | INTERGENIC | None |