Detailed information of SNP:
|
SNP ID:
sf0234811090(Gbrowse)
Chromosome: chr02 Position: 34811090 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1295 | 93.67% | 6.33% |
| All Indica | 688 | 88.37% | 11.63% |
| All Japonica | 485 | 99.79% | 0.21% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 338 | 85.80% | 14.20% |
| Indica II | 154 | 90.91% | 9.09% |
| Indica Intermediate | 196 | 90.82% | 9.18% |
| Temperate Japonica | 333 | 100.00% | 0.00% |
| Tropical Japonica | 85 | 98.82% | 1.18% |
| Japonica Intermediate | 67 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0234811090 | G->A | INTERGENIC | None |