Detailed information of SNP:



SNP ID: sf0235577535(Gbrowse)

Chromosome: chr02

Position: 35577535
Major allele: A

Minor allele: G

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1417 58.01% 41.99%
All Indica798 95.61% 4.39%
All Japonica497 2.62% 97.38%
Aus67 31.34% 68.66%
Indica I374 96.79% 3.21%
Indica II213 98.12% 1.88%
Indica Intermediate211 91.00% 9.00%
Temperate Japonica335 2.39% 97.61%
Tropical Japonica94 3.19% 96.81%
Japonica Intermediate68 2.94% 97.06%
Group VI/Aromatic14 21.43% 78.57%
Intermediate41 53.66% 46.34%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0235577535 G->A INTERGENIC None