Detailed information of SNP:
|
SNP ID:
sf0235711911(Gbrowse)
Chromosome: chr02 Position: 35711911 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1167 | 97.09% | 2.91% |
| All Indica | 552 | 94.02% | 5.98% |
| All Japonica | 496 | 100.00% | 0.00% |
| Aus | 64 | 98.44% | 1.56% |
| Indica I | 184 | 84.78% | 15.22% |
| Indica II | 198 | 99.49% | 0.51% |
| Indica Intermediate | 170 | 97.65% | 2.35% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 93 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0235711911 | A->G | INTERGENIC | None |