Detailed information of SNP:
SNP ID:
sf0301937067(Gbrowse)
Chromosome: chr03 Position: 1937067 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
---|---|---|---|
All | 1368 | 98.61% | 1.39% |
All Indica | 797 | 100.00% | 0.00% |
All Japonica | 450 | 95.78% | 4.22% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 375 | 100.00% | 0.00% |
Indica II | 211 | 100.00% | 0.00% |
Indica Intermediate | 211 | 100.00% | 0.00% |
Temperate Japonica | 297 | 93.60% | 6.40% |
Tropical Japonica | 91 | 100.00% | 0.00% |
Japonica Intermediate | 62 | 100.00% | 0.00% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 40 | 100.00% | 0.00% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0301937067 | G->A | INTERGENIC | None |