Detailed information of SNP:



SNP ID: sf0303914808(Gbrowse)

Chromosome: chr03

Position: 3914808
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1405 96.09% 3.91%
All Indica788 95.18% 4.82%
All Japonica497 100.00% 0.00%
Aus64 78.12% 21.88%
Indica I371 97.57% 2.43%
Indica II211 91.47% 8.53%
Indica Intermediate206 94.66% 5.34%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 92.86% 7.14%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0303914808 C->T INTERGENIC None