Detailed information of SNP:
|
SNP ID:
sf0306022926(Gbrowse)
Chromosome: chr03 Position: 6022926 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1419 | 53.00% | 47.00% |
| All Indica | 799 | 91.86% | 8.14% |
| All Japonica | 497 | 0.40% | 99.60% |
| Aus | 67 | 1.49% | 98.51% |
| Indica I | 375 | 92.80% | 7.20% |
| Indica II | 213 | 95.77% | 4.23% |
| Indica Intermediate | 211 | 86.26% | 13.74% |
| Temperate Japonica | 335 | 0.60% | 99.40% |
| Tropical Japonica | 94 | 0.00% | 100.00% |
| Japonica Intermediate | 68 | 0.00% | 100.00% |
| Group VI/Aromatic | 14 | 0.00% | 100.00% |
| Intermediate | 42 | 35.71% | 64.29% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0306022926 | A->G | INTERGENIC | None |