Detailed information of SNP:
|
SNP ID:
sf0307108768(Gbrowse)
Chromosome: chr03 Position: 7108768 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1413 | 96.60% | 3.40% |
| All Indica | 793 | 94.33% | 5.67% |
| All Japonica | 497 | 99.60% | 0.40% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 371 | 92.72% | 7.28% |
| Indica II | 213 | 99.06% | 0.94% |
| Indica Intermediate | 209 | 92.34% | 7.66% |
| Temperate Japonica | 335 | 99.40% | 0.60% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0307108768 | G->A | INTERGENIC | None |