Detailed information of SNP:



SNP ID: sf0308125558(Gbrowse)

Chromosome: chr03

Position: 8125558
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1418 93.51% 6.49%
All Indica799 100.00% 0.00%
All Japonica497 82.09% 17.91%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica335 94.33% 5.67%
Tropical Japonica94 64.89% 35.11%
Japonica Intermediate68 45.59% 54.41%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 92.68% 7.32%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0308125558 G->A INTERGENIC None