Detailed information of SNP:



SNP ID: sf0308625419(Gbrowse)

Chromosome: chr03

Position: 8625419
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1417 71.28% 28.72%
All Indica797 61.73% 38.27%
All Japonica497 99.40% 0.60%
Aus67 1.49% 98.51%
Indica I373 86.60% 13.40%
Indica II213 13.15% 86.85%
Indica Intermediate211 66.82% 33.18%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 97.87% 2.13%
Japonica Intermediate68 98.53% 1.47%
Group VI/Aromatic14 0.00% 100.00%
Intermediate42 54.76% 45.24%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0308625419 G->A INTERGENIC None