Detailed information of SNP:



SNP ID: sf0310512268(Gbrowse)

Chromosome: chr03

Position: 10512268
Major allele: A

Minor allele: T

Reference allele: T

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of T(minor allele)
All1418 98.87% 1.13%
All Indica798 100.00% 0.00%
All Japonica497 96.98% 3.02%
Aus67 100.00% 0.00%
Indica I374 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica335 95.82% 4.18%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 98.53% 1.47%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0310512268 T->A INTERGENIC None