Detailed information of SNP:



SNP ID: sf0310835776(Gbrowse)

Chromosome: chr03

Position: 10835776
Major allele: A

Minor allele: G

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1419 65.61% 34.39%
All Indica799 99.00% 1.00%
All Japonica497 19.52% 80.48%
Aus67 25.37% 74.63%
Indica I375 98.93% 1.07%
Indica II213 100.00% 0.00%
Indica Intermediate211 98.10% 1.90%
Temperate Japonica335 0.00% 100.00%
Tropical Japonica94 89.36% 10.64%
Japonica Intermediate68 19.12% 80.88%
Group VI/Aromatic14 7.14% 92.86%
Intermediate42 59.52% 40.48%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0310835776 G->A INTERGENIC None