Detailed information of SNP:



SNP ID: sf0313640648(Gbrowse)

Chromosome: chr03

Position: 13640648
Major allele: G

Minor allele: A

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1413 91.37% 8.63%
All Indica799 100.00% 0.00%
All Japonica492 75.81% 24.19%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica330 67.58% 32.42%
Tropical Japonica94 96.81% 3.19%
Japonica Intermediate68 86.76% 13.24%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 92.68% 7.32%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0313640648 A->G INTERGENIC None