Detailed information of SNP:



SNP ID: sf0314105798(Gbrowse)

Chromosome: chr03

Position: 14105798
Major allele: T

Minor allele: C

Reference allele: T

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of T(major allele)Frequency of C(minor allele)
All1378 98.40% 1.60%
All Indica799 100.00% 0.00%
All Japonica459 95.42% 4.58%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica331 100.00% 0.00%
Tropical Japonica69 73.91% 26.09%
Japonica Intermediate59 94.92% 5.08%
Group VI/Aromatic14 100.00% 0.00%
Intermediate39 97.44% 2.56%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0314105798 T->C INTERGENIC None