Detailed information of SNP:
|
SNP ID:
sf0314120993(Gbrowse)
Chromosome: chr03 Position: 14120993 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1415 | 92.16% | 7.84% |
| All Indica | 799 | 100.00% | 0.00% |
| All Japonica | 494 | 80.16% | 19.84% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 211 | 100.00% | 0.00% |
| Temperate Japonica | 335 | 97.91% | 2.09% |
| Tropical Japonica | 93 | 25.81% | 74.19% |
| Japonica Intermediate | 66 | 66.67% | 33.33% |
| Group VI/Aromatic | 14 | 64.29% | 35.71% |
| Intermediate | 41 | 82.93% | 17.07% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0314120993 | G->A | INTERGENIC | None |