Detailed information of SNP:



SNP ID: sf0314429304(Gbrowse)

Chromosome: chr03

Position: 14429304
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1375 87.27% 12.73%
All Indica760 79.21% 20.79%
All Japonica497 100.00% 0.00%
Aus63 76.19% 23.81%
Indica I351 74.36% 25.64%
Indica II203 73.40% 26.60%
Indica Intermediate206 93.20% 6.80%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 95.12% 4.88%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0314429304 C->T INTERGENIC None