Detailed information of SNP:
|
SNP ID:
sf0314839593(Gbrowse)
Chromosome: chr03 Position: 14839593 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1285 | 93.62% | 6.38% |
| All Indica | 722 | 89.06% | 10.94% |
| All Japonica | 445 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 339 | 91.74% | 8.26% |
| Indica II | 195 | 88.72% | 11.28% |
| Indica Intermediate | 188 | 84.57% | 15.43% |
| Temperate Japonica | 298 | 100.00% | 0.00% |
| Tropical Japonica | 90 | 100.00% | 0.00% |
| Japonica Intermediate | 57 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 37 | 91.89% | 8.11% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0314839593 | G->A | INTERGENIC | None |