Detailed information of SNP:



SNP ID: sf0316758232(Gbrowse)

Chromosome: chr03

Position: 16758232
Major allele: G

Minor allele: T

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of T(minor allele)
All1419 80.48% 19.52%
All Indica799 72.09% 27.91%
All Japonica497 100.00% 0.00%
Aus67 26.87% 73.13%
Indica I375 59.20% 40.80%
Indica II213 90.61% 9.39%
Indica Intermediate211 76.30% 23.70%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 88.10% 11.90%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0316758232 G->T INTERGENIC None