Detailed information of SNP:
|
SNP ID:
sf0316892843(Gbrowse)
Chromosome: chr03 Position: 16892843 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1267 | 97.16% | 2.84% |
| All Indica | 754 | 99.47% | 0.53% |
| All Japonica | 391 | 92.07% | 7.93% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 371 | 100.00% | 0.00% |
| Indica II | 187 | 97.86% | 2.14% |
| Indica Intermediate | 196 | 100.00% | 0.00% |
| Temperate Japonica | 268 | 89.18% | 10.82% |
| Tropical Japonica | 72 | 98.61% | 1.39% |
| Japonica Intermediate | 51 | 98.04% | 1.96% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0316892843 | A->G | INTERGENIC | None |