Detailed information of SNP:



SNP ID: sf0318765005(Gbrowse)

Chromosome: chr03

Position: 18765005
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1383 95.73% 4.27%
All Indica764 92.80% 7.20%
All Japonica497 100.00% 0.00%
Aus67 100.00% 0.00%
Indica I358 92.18% 7.82%
Indica II204 97.55% 2.45%
Indica Intermediate202 89.11% 10.89%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 90.24% 9.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0318765005 C->T INTERGENIC None