Detailed information of SNP:



SNP ID: sf0318822435(Gbrowse)

Chromosome: chr03

Position: 18822435
Major allele: T

Minor allele: C

Reference allele: T

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of T(major allele)Frequency of C(minor allele)
All1401 95.15% 4.85%
All Indica783 91.70% 8.30%
All Japonica497 100.00% 0.00%
Aus65 96.92% 3.08%
Indica I368 90.76% 9.24%
Indica II210 89.05% 10.95%
Indica Intermediate205 96.10% 3.90%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0318822435 T->C INTERGENIC None