Detailed information of SNP:
|
SNP ID:
sf0319112203(Gbrowse)
Chromosome: chr03 Position: 19112203 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1383 | 96.96% | 3.04% |
| All Indica | 798 | 100.00% | 0.00% |
| All Japonica | 463 | 91.14% | 8.86% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 212 | 100.00% | 0.00% |
| Indica Intermediate | 211 | 100.00% | 0.00% |
| Temperate Japonica | 306 | 87.91% | 12.09% |
| Tropical Japonica | 92 | 97.83% | 2.17% |
| Japonica Intermediate | 65 | 96.92% | 3.08% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0319112203 | A->G | INTERGENIC | None |