Detailed information of SNP:
|
SNP ID:
sf0320594616(Gbrowse)
Chromosome: chr03 Position: 20594616 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1366 | 96.49% | 3.51% |
| All Indica | 747 | 93.71% | 6.29% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 335 | 88.36% | 11.64% |
| Indica II | 211 | 98.58% | 1.42% |
| Indica Intermediate | 201 | 97.51% | 2.49% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0320594616 | G->A | INTERGENIC | None |