Detailed information of SNP:
|
SNP ID:
sf0320910569(Gbrowse)
Chromosome: chr03 Position: 20910569 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1362 | 96.04% | 3.96% |
| All Indica | 744 | 92.88% | 7.12% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 66 | 100.00% | 0.00% |
| Indica I | 326 | 88.65% | 11.35% |
| Indica II | 213 | 99.53% | 0.47% |
| Indica Intermediate | 205 | 92.68% | 7.32% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0320910569 | A->G | INTERGENIC | None |