Detailed information of SNP:
|
SNP ID:
sf0321593567(Gbrowse)
Chromosome: chr03 Position: 21593567 |
Major allele:
C
Minor allele: G Reference allele: C |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of C(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1279 | 94.61% | 5.39% |
| All Indica | 666 | 90.69% | 9.31% |
| All Japonica | 496 | 100.00% | 0.00% |
| Aus | 63 | 93.65% | 6.35% |
| Indica I | 289 | 88.24% | 11.76% |
| Indica II | 198 | 94.95% | 5.05% |
| Indica Intermediate | 179 | 89.94% | 10.06% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 93 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 92.50% | 7.50% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0321593567 | C->G | INTERGENIC | None |