Detailed information of SNP:
SNP ID:
sf0321771051(Gbrowse)
Chromosome: chr03 Position: 21771051 |
Major allele:
A
Minor allele: G Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
---|---|---|---|
All | 1416 | 55.30% | 44.70% |
All Indica | 797 | 93.60% | 6.40% |
All Japonica | 497 | 0.40% | 99.60% |
Aus | 67 | 25.37% | 74.63% |
Indica I | 375 | 94.93% | 5.07% |
Indica II | 212 | 92.92% | 7.08% |
Indica Intermediate | 210 | 91.90% | 8.10% |
Temperate Japonica | 335 | 0.00% | 100.00% |
Tropical Japonica | 94 | 2.13% | 97.87% |
Japonica Intermediate | 68 | 0.00% | 100.00% |
Group VI/Aromatic | 14 | 7.14% | 92.86% |
Intermediate | 41 | 41.46% | 58.54% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0321771051 | G->A | INTERGENIC | None |