Detailed information of SNP:



SNP ID: sf0321778710(Gbrowse)

Chromosome: chr03

Position: 21778710
Major allele: C

Minor allele: A

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of A(minor allele)
All1418 78.28% 21.72%
All Indica798 61.90% 38.10%
All Japonica497 100.00% 0.00%
Aus67 100.00% 0.00%
Indica I375 35.73% 64.27%
Indica II213 92.49% 7.51%
Indica Intermediate210 77.62% 22.38%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 90.48% 9.52%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0321778710 C->A INTERGENIC None