Detailed information of SNP:
|
SNP ID:
sf0321853961(Gbrowse)
Chromosome: chr03 Position: 21853961 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1395 | 97.20% | 2.80% |
| All Indica | 780 | 95.90% | 4.10% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 63 | 92.06% | 7.94% |
| Indica I | 367 | 97.28% | 2.72% |
| Indica II | 205 | 93.17% | 6.83% |
| Indica Intermediate | 208 | 96.15% | 3.85% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 95.12% | 4.88% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0321853961 | G->A | INTERGENIC | None |