Detailed information of SNP:
|
SNP ID:
sf0322359024(Gbrowse)
Chromosome: chr03 Position: 22359024 |
Major allele:
G
Minor allele: T Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of T(minor allele) |
|---|---|---|---|
| All | 1380 | 97.46% | 2.54% |
| All Indica | 762 | 95.93% | 4.07% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 358 | 95.25% | 4.75% |
| Indica II | 208 | 96.63% | 3.37% |
| Indica Intermediate | 196 | 96.43% | 3.57% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 90.00% | 10.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0322359024 | G->T | INTERGENIC | None |