Detailed information of SNP:
|
SNP ID:
sf0323937858(Gbrowse)
Chromosome: chr03 Position: 23937858 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1417 | 56.03% | 43.97% |
| All Indica | 799 | 96.12% | 3.88% |
| All Japonica | 497 | 0.00% | 100.00% |
| Aus | 67 | 8.96% | 91.04% |
| Indica I | 375 | 94.93% | 5.07% |
| Indica II | 213 | 97.18% | 2.82% |
| Indica Intermediate | 211 | 97.16% | 2.84% |
| Temperate Japonica | 335 | 0.00% | 100.00% |
| Tropical Japonica | 94 | 0.00% | 100.00% |
| Japonica Intermediate | 68 | 0.00% | 100.00% |
| Group VI/Aromatic | 14 | 7.14% | 92.86% |
| Intermediate | 40 | 47.50% | 52.50% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0323937858 | A->G | INTERGENIC | None |