Detailed information of SNP:
|
SNP ID:
sf0324096832(Gbrowse)
Chromosome: chr03 Position: 24096832 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1369 | 78.89% | 21.11% |
| All Indica | 753 | 62.82% | 37.18% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 66 | 89.39% | 10.61% |
| Indica I | 353 | 71.67% | 28.33% |
| Indica II | 200 | 53.00% | 47.00% |
| Indica Intermediate | 200 | 57.00% | 43.00% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 39 | 94.87% | 5.13% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0324096832 | G->A | INTERGENIC | None |