Detailed information of SNP:
|
SNP ID:
sf0324612124(Gbrowse)
Chromosome: chr03 Position: 24612124 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1418 | 90.13% | 9.87% |
| All Indica | 798 | 88.35% | 11.65% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 67 | 49.25% | 50.75% |
| Indica I | 375 | 87.47% | 12.53% |
| Indica II | 213 | 89.20% | 10.80% |
| Indica Intermediate | 210 | 89.05% | 10.95% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 71.43% | 28.57% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0324612124 | A->G | INTERGENIC | None |